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  5. Solyc10g006120

Solyc10g006120


Description : extracellular ligand-gated ion channel protein (DUF3537) (AHRD V3.3 *** AT3G20300.1)


Gene families : OG_42_0001321 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g006120
Cluster HCCA clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G137800 No alias Function unknown 0.03 Orthogroups_2024-Update
Solyc07g064900 No alias extracellular ligand-gated ion channel protein (DUF3537)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR021924 DUF3537 25 417
No external refs found!