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Description : Cell differentiation protein rcd1, putative (AHRD V3.3 *** B9STZ0_RICCO)
Gene families : OG_42_0001577 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001577_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc10g006220 | |
| Cluster | HCCA clusters: Cluster_244 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_34666 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G033500.1 | No alias | component *(NOT9) of mRNA deadenylation CCR4-NOT complex | 0.02 | Orthogroups_2024-Update | |
| Solyc10g006170 | No alias | Rcd1-like cell differentiation family protein (AHRD V3.3... | 0.06 | Orthogroups_2024-Update | |
| evm.model.contig_4413.6 | No alias | (at3g20800 : 372.0) Cell differentiation, Rcd1-like... | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| CC | GO:0009521 | photosystem | IEP | Predicted GO |
| CC | GO:0009522 | photosystem I | IEP | Predicted GO |
| CC | GO:0009523 | photosystem II | IEP | Predicted GO |
| CC | GO:0009538 | photosystem I reaction center | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Predicted GO |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Predicted GO |
| BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| CC | GO:0044425 | membrane part | IEP | Predicted GO |
| CC | GO:0044436 | thylakoid part | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
| CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |