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Description : (at4g02750 : 602.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 147.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1094.0) & (original description: no original description)
Gene families : OG_42_0014386 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0014386_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_10257685g0010 | |
| Cluster | HCCA clusters: Cluster_7 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001101 | response to acid chemical | IEP | Predicted GO |
| MF | GO:0003993 | acid phosphatase activity | IEP | Predicted GO |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Predicted GO |
| BP | GO:0006721 | terpenoid metabolic process | IEP | Predicted GO |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Predicted GO |
| MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | Predicted GO |
| BP | GO:0009415 | response to water | IEP | Predicted GO |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
| BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | Predicted GO |
| MF | GO:0016744 | transferase activity, transferring aldehyde or ketonic groups | IEP | Predicted GO |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 412 | 440 |
| IPR002885 | Pentatricopeptide_repeat | 443 | 490 |
| IPR002885 | Pentatricopeptide_repeat | 148 | 195 |
| IPR002885 | Pentatricopeptide_repeat | 310 | 359 |
| IPR002885 | Pentatricopeptide_repeat | 544 | 592 |
| IPR032867 | DYW_dom | 717 | 841 |
| IPR002885 | Pentatricopeptide_repeat | 223 | 248 |
| IPR002885 | Pentatricopeptide_repeat | 518 | 542 |
| IPR002885 | Pentatricopeptide_repeat | 618 | 642 |
| IPR002885 | Pentatricopeptide_repeat | 386 | 411 |
| IPR002885 | Pentatricopeptide_repeat | 251 | 281 |
| No external refs found! |