1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10271866g0010

MA_10271866g0010


Description : (at1g01225 : 238.0) NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT4G00905.1); Has 173 Blast hits to 172 proteins in 34 species: Archae - 0; Bacteria - 24; Metazoa - 5; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 476.0) & (original description: no original description)


Gene families : OG_42_0000709 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000709_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10271866g0010
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G124802 No alias NC domain-containing protein-related 0.02 Orthogroups_2024-Update
MA_105837g0010 No alias (at5g06370 : 231.0) NC domain-containing... 0.03 Orthogroups_2024-Update
PSME_00009488-RA No alias (at1g01225 : 221.0) NC domain-containing... 0.09 Orthogroups_2024-Update
PSME_00009489-RA No alias (at5g06370 : 229.0) NC domain-containing... 0.04 Orthogroups_2024-Update
Potri.005G056200 No alias NC domain-containing protein-related 0.03 Orthogroups_2024-Update
Potri.013G043100 No alias NC domain-containing protein-related 0.03 Orthogroups_2024-Update
Sobic.008G004700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen01g039880 No alias Lecithin retinol acyltransferase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007053 LRAT-like_dom 20 174
No external refs found!