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  5. MA_10279796g0010

MA_10279796g0010


Description : (at1g67480 : 412.0) Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G27420.1); Has 11510 Blast hits to 6062 proteins in 581 species: Archae - 21; Bacteria - 896; Metazoa - 8265; Fungi - 112; Plants - 1475; Viruses - 165; Other Eukaryotes - 576 (source: NCBI BLink). & (reliability: 824.0) & (original description: no original description)


Gene families : OG_42_0002284 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002284_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10279796g0010
Cluster HCCA clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G068790.6 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00028385-RA No alias (at1g67480 : 421.0) Galactose oxidase/kelch repeat... 0.03 Orthogroups_2024-Update
Sobic.006G048100.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006652 Kelch_1 283 323
IPR006652 Kelch_1 181 228
IPR006652 Kelch_1 231 276
IPR001810 F-box_dom 93 132
No external refs found!