1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g095030

Solyc01g095030


Description : Myb family transcription factor family protein (AHRD V3.3 *** B9I8P3_POPTR)


Gene families : OG_42_0000380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g095030
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
78045 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
A4A49_01132 No alias protein reveille 8 0.04 Orthogroups_2024-Update
A4A49_11843 No alias protein reveille 6 0.05 Orthogroups_2024-Update
At1g01520 No alias ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835] 0.02 Orthogroups_2024-Update
At1g18330 No alias Protein REVEILLE 7 [Source:UniProtKB/Swiss-Prot;Acc:B3H5A8] 0.04 Orthogroups_2024-Update
At2g46830 No alias Protein CCA1 [Source:UniProtKB/Swiss-Prot;Acc:P92973] 0.08 Orthogroups_2024-Update
At3g09600 No alias Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3] 0.05 Orthogroups_2024-Update
At4g01280 No alias Protein REVEILLE 5 [Source:UniProtKB/Swiss-Prot;Acc:C0SVG5] 0.03 Orthogroups_2024-Update
At5g02840 No alias LCL1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Z5] 0.06 Orthogroups_2024-Update
At5g17300 No alias Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6] 0.04 Orthogroups_2024-Update
At5g37260 No alias Protein REVEILLE 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K5X6] 0.03 Orthogroups_2024-Update
Bradi1g29680 No alias Homeodomain-like superfamily protein 0.06 Orthogroups_2024-Update
Bradi3g51757 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g51960 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.A03523.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.05 Orthogroups_2024-Update
Brara.C00086.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.05 Orthogroups_2024-Update
Brara.C00761.1 No alias transcription factor *(REVEILLE) 0.04 Orthogroups_2024-Update
Brara.E00100.1 No alias circadian clock core oscillator protein *(LHY/CCA1) &... 0.03 Orthogroups_2024-Update
Brara.I00054.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Brara.J01819.1 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
Brara.J02851.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.04 Orthogroups_2024-Update
GRMZM2G029850 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G118693 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G177300 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G167900 No alias Homeodomain-like superfamily protein 0.07 Orthogroups_2024-Update
Glyma.10G048500 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G136300 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G217700 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G237700 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G031850.2 No alias circadian clock factor *(REVEILLE) & transcription... 0.06 Orthogroups_2024-Update
HORVU6Hr1G066000.2 No alias circadian clock factor *(REVEILLE) & transcription... 0.06 Orthogroups_2024-Update
HORVU7Hr1G001830.3 No alias circadian clock factor *(REVEILLE) & transcription... 0.04 Orthogroups_2024-Update
HORVU7Hr1G121210.4 No alias transcription factor *(REVEILLE) 0.06 Orthogroups_2024-Update
LOC_Os02g45670 No alias myb-like DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g51260 No alias MYB family transcription factor, putative, expressed 0.05 Orthogroups_2024-Update
MA_11267g0020 No alias (at2g46830 : 141.0) Encodes a transcriptional repressor... 0.03 Orthogroups_2024-Update
MA_115536g0010 No alias (at1g01060 : 122.0) LHY encodes a myb-related putative... 0.03 Orthogroups_2024-Update
Potri.006G133000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s198_135V6 No alias dna binding protein 0.02 Orthogroups_2024-Update
Pp1s325_68V6 No alias lhy protein 0.05 Orthogroups_2024-Update
Seita.1G272700.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.04 Orthogroups_2024-Update
Seita.4G004600.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Seita.4G288100.1 No alias transcription factor *(REVEILLE) 0.04 Orthogroups_2024-Update
Sobic.004G281800.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.06 Orthogroups_2024-Update
Sobic.010G004300.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.06 Orthogroups_2024-Update
Sobic.010G275700.1 No alias transcription factor *(REVEILLE) 0.04 Orthogroups_2024-Update
Sopen01g038820 No alias Myb-like DNA-binding domain 0.14 Orthogroups_2024-Update
Sopen02g011740 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen03g029070 No alias Myb-like DNA-binding domain 0.05 Orthogroups_2024-Update
evm.model.tig00000769.37 No alias (at3g09600 : 109.0) Homeodomain-like superfamily... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070402 NADPH binding IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 68 112
No external refs found!