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  5. MA_10339613g0010

MA_10339613g0010


Description : (at2g21600 : 103.0) Key player of retrieval of ER membrane proteins; endoplasmatic reticulum retrieval protein 1B (RER1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: Golgi apparatus, endoplasmic reticulum, cis-Golgi network; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 516 Blast hits to 512 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 152; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 206.0) & (original description: no original description)


Gene families : OG_42_0001247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001247_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10339613g0010
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
438307 No alias Rer1 family protein 0.02 Orthogroups_2024-Update
Sopen02g037570 No alias Rer1 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004932 Rer1 17 89
No external refs found!