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  5. MA_10353668g0010

MA_10353668g0010


Description : (at4g24780 : 563.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1). & (p40973|pel_lillo : 419.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 1126.0) & (original description: no original description)


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10353668g0010
Cluster HCCA clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
A4A49_12542 No alias pectate lyase 0.03 Orthogroups_2024-Update
At3g27400 No alias Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNU6] 0.02 Orthogroups_2024-Update
Glyma.04G191100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G244900 No alias Pectate lyase family protein 0.02 Orthogroups_2024-Update
Glyma.19G053800 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
MA_10335560g0010 No alias (at4g13210 : 131.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00032290-RA No alias (at4g24780 : 602.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Solyc02g067450 No alias Pectate lyase (AHRD V3.3 *** M1A9L8_SOLTU) 0.02 Orthogroups_2024-Update
Solyc05g055510 No alias Pectate lyase (AHRD V3.3 *** K4C2M7_SOLLC) 0.02 Orthogroups_2024-Update
Sopen02g025600 No alias Pectate lyase 0.02 Orthogroups_2024-Update
Sopen09g024960 No alias Pectate lyase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008272 sulfate transport IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
CC GO:0019013 viral nucleocapsid IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0044423 virion part IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002022 Pec_lyase 155 339
No external refs found!