1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10375806g0010

MA_10375806g0010


Description : (at2g46600 : 129.0) Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: pinoid-binding protein 1 (TAIR:AT5G54490.1); Has 2760 Blast hits to 2760 proteins in 443 species: Archae - 0; Bacteria - 4; Metazoa - 1146; Fungi - 226; Plants - 931; Viruses - 0; Other Eukaryotes - 453 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description)


Gene families : OG_42_0000762 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10375806g0010
Cluster HCCA clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
A4A49_18148 No alias calcium-binding protein pbp1 0.04 Orthogroups_2024-Update
A4A49_60364 No alias calcium-binding protein pbp1 0.03 Orthogroups_2024-Update
At2g46600 No alias Calcium-binding protein KIC... 0.03 Orthogroups_2024-Update
Bradi3g02210 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Glyma.12G142900 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
HORVU7Hr1G101790.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10212526g0010 No alias (at2g46600 : 81.6) Calcium-binding EF-hand family... 0.05 Orthogroups_2024-Update
MA_10435835g0010 No alias (at2g46600 : 85.1) Calcium-binding EF-hand family... 0.04 Orthogroups_2024-Update
PSME_00030209-RA No alias (at2g46600 : 129.0) Calcium-binding EF-hand family... 0.03 Orthogroups_2024-Update
Potri.001G411800 No alias Calcium-binding EF-hand family protein 0.06 Orthogroups_2024-Update
Potri.011G129100 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Potri.013G151000 No alias pinoid-binding protein 1 0.03 Orthogroups_2024-Update
Potri.014G101700 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Seita.1G107200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G234000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen10g002620 No alias EF-hand domain pair 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 86 136
No external refs found!