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  5. MA_10381g0010

MA_10381g0010


Description : (at2g43040 : 370.0) encodes a calmodulin-binding protein that is expressed specifically in pollen and is required for pollen development.; no pollen germination 1 (NPG1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: no pollen germination related 2 (TAIR:AT4G28600.1); Has 573 Blast hits to 561 proteins in 155 species: Archae - 29; Bacteria - 89; Metazoa - 223; Fungi - 37; Plants - 141; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 740.0) & (original description: no original description)


Gene families : OG_42_0000959 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000959_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10381g0010
Cluster HCCA clusters: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
A4A49_15652 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Potri.010G068700 No alias no pollen germination related 2 0.03 Orthogroups_2024-Update
Seita.8G112500.1 No alias component *(NPG) of phosphatidylinositol 4-kinase complex 0.02 Orthogroups_2024-Update
Sopen06g003090 No alias Tetratricopeptide repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
CC GO:0005740 mitochondrial envelope IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
CC GO:0031967 organelle envelope IEP Predicted GO
CC GO:0031975 envelope IEP Predicted GO
InterPro domains Description Start Stop
IPR019734 TPR_repeat 707 739
No external refs found!