Description : (at5g60590 : 179.0) DHBP synthase RibB-like alpha/beta domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sua5/YciO/YrdC/YwlC (InterPro:IPR004388), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945), Sua5/YciO/YrdC, N-terminal (InterPro:IPR006070); BEST Arabidopsis thaliana protein match is: DHBP synthase RibB-like alpha/beta domain (TAIR:AT3G01920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 358.0) & (original description: no original description)
Gene families : OG_42_0006392 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006392_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_10426252g0010 | |
Cluster | HCCA clusters: Cluster_226 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003725 | double-stranded RNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004363 | glutathione synthase activity | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006749 | glutathione metabolic process | IEP | Predicted GO |
BP | GO:0006750 | glutathione biosynthetic process | IEP | Predicted GO |
BP | GO:0006790 | sulfur compound metabolic process | IEP | Predicted GO |
BP | GO:0006810 | transport | IEP | Predicted GO |
BP | GO:0006811 | ion transport | IEP | Predicted GO |
BP | GO:0006812 | cation transport | IEP | Predicted GO |
BP | GO:0006835 | dicarboxylic acid transport | IEP | Predicted GO |
BP | GO:0015711 | organic anion transport | IEP | Predicted GO |
BP | GO:0015740 | C4-dicarboxylate transport | IEP | Predicted GO |
BP | GO:0015743 | malate transport | IEP | Predicted GO |
BP | GO:0015849 | organic acid transport | IEP | Predicted GO |
CC | GO:0016021 | integral component of membrane | IEP | Predicted GO |
MF | GO:0016829 | lyase activity | IEP | Predicted GO |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Predicted GO |
MF | GO:0016831 | carboxy-lyase activity | IEP | Predicted GO |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | Predicted GO |
BP | GO:0019184 | nonribosomal peptide biosynthetic process | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
BP | GO:0030001 | metal ion transport | IEP | Predicted GO |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
CC | GO:0031224 | intrinsic component of membrane | IEP | Predicted GO |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044425 | membrane part | IEP | Predicted GO |
BP | GO:0046942 | carboxylic acid transport | IEP | Predicted GO |
BP | GO:0051179 | localization | IEP | Predicted GO |
BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006070 | YrdC-like_dom | 3 | 140 |
No external refs found! |