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Description : (at5g03760 : 280.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 560.0) & (original description: no original description)
Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_10426467g0020 | |
| Cluster | HCCA clusters: Cluster_99 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_05665 | No alias | putative xyloglucan glycosyltransferase 5 | 0.02 | Orthogroups_2024-Update | |
| Bradi2g20141 | No alias | Cellulose-synthase-like C12 | 0.02 | Orthogroups_2024-Update | |
| Brara.C02554.1 | No alias | 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase | 0.03 | Orthogroups_2024-Update | |
| Brara.G00952.1 | No alias | EC_2.4 glycosyltransferase & mannan synthase *(CSLA) | 0.03 | Orthogroups_2024-Update | |
| Brara.K01643.1 | No alias | 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase | 0.03 | Orthogroups_2024-Update | |
| LOC_Os03g07350 | No alias | CSLA4 - cellulose synthase-like family A; mannan... | 0.03 | Orthogroups_2024-Update | |
| PSME_00009050-RA | No alias | (at4g31590 : 895.0) encodes a gene similar to cellulose... | 0.04 | Orthogroups_2024-Update | |
| Pp1s36_214V6 | No alias | cellulose synthase-like A3, glycosyltransferase family 2... | 0.02 | Orthogroups_2024-Update | |
| Pp1s36_62V6 | No alias | cellulose synthase-like A2, glycosyltransferase family 2... | 0.03 | Orthogroups_2024-Update | |
| Pp1s65_194V6 | No alias | cellulose synthase-like A1, glycosyltransferase family 2... | 0.04 | Orthogroups_2024-Update | |
| Seita.2G139000.1 | No alias | EC_2.4 glycosyltransferase & mannan synthase *(CSLA) | 0.02 | Orthogroups_2024-Update | |
| Seita.9G075000.1 | No alias | 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Predicted GO |
| MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Predicted GO |
| BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
| MF | GO:0030695 | GTPase regulator activity | IEP | Predicted GO |
| BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001173 | Glyco_trans_2-like | 104 | 185 |
| No external refs found! |