MA_10426811g0010

Description : (at1g05200 : 243.0) member of Putative ligand-gated ion channel subunit family; glutamate receptor 3.4 (GLR3.4); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Glutamate receptor-related (InterPro:IPR015683), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Extracellular ligand-binding receptor (InterPro:IPR001828), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.5 (TAIR:AT2G32390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xp59|glr31_orysa : 208.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 486.0) & (original description: no original description)

Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_10426811g0010
Cluster	HCCA clusters: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
A4A49_28967	No alias	glutamate receptor 2.8	0.03	Orthogroups_2024-Update
A4A49_37064	No alias	glutamate receptor 3.2	0.03	Orthogroups_2024-Update
At5g11180	No alias	Glutamate receptor 2.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFN8]	0.03	Orthogroups_2024-Update
Bradi1g31350	No alias	glutamate receptor 2.2	0.02	Orthogroups_2024-Update
Bradi1g59600	No alias	glutamate receptor 3.4	0.03	Orthogroups_2024-Update
Bradi3g53690	No alias	glutamate receptor 2.7	0.02	Orthogroups_2024-Update
Bradi4g30840	No alias	glutamate receptor 2.7	0.03	Orthogroups_2024-Update
Brara.F03008.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
Brara.H01149.1	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
GRMZM2G139933	No alias	glutamate receptor 2.7	0.03	Orthogroups_2024-Update
Glyma.07G226400	No alias	glutamate receptor 2.8	0.03	Orthogroups_2024-Update
Glyma.13G172100	No alias	glutamate receptor 2.7	0.02	Orthogroups_2024-Update
HORVU0Hr1G036590.3	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
HORVU2Hr1G049510.4	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
HORVU5Hr1G010420.23	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
PSME_00001292-RA	No alias	(at4g35290 : 567.0) Encodes a putative glutamate...	0.04	Orthogroups_2024-Update
PSME_00010771-RA	No alias	(at1g42540 : 809.0) member of Putative ligand-gated ion...	0.04	Orthogroups_2024-Update
PSME_00018332-RA	No alias	(at1g05200 : 548.0) member of Putative ligand-gated ion...	0.03	Orthogroups_2024-Update
PSME_00020112-RA	No alias	(at1g42540 : 726.0) member of Putative ligand-gated ion...	0.03	Orthogroups_2024-Update
PSME_00021963-RA	No alias	(at1g05200 : 294.0) member of Putative ligand-gated ion...	0.04	Orthogroups_2024-Update
PSME_00027643-RA	No alias	(at2g29120 : 565.0) member of Putative ligand-gated ion...	0.03	Orthogroups_2024-Update
PSME_00027644-RA	No alias	(at2g29120 : 490.0) member of Putative ligand-gated ion...	0.01	Orthogroups_2024-Update
PSME_00037073-RA	No alias	(at2g17260 : 246.0) Encodes a glutamate receptor....	0.03	Orthogroups_2024-Update
Potri.001G374700	No alias	glutamate receptor 2.7	0.02	Orthogroups_2024-Update
Potri.006G269100	No alias	glutamate receptor 2.8	0.03	Orthogroups_2024-Update
Potri.011G062900	No alias	glutamate receptor 2.7	0.03	Orthogroups_2024-Update
Potri.018G012000	No alias	glutamate receptor 2.7	0.03	Orthogroups_2024-Update
Seita.1G009400.1	No alias	ligand-gated cation channel *(GLR)	0.01	Orthogroups_2024-Update
Seita.1G346100.1	No alias	ligand-gated cation channel *(GLR)	0.05	Orthogroups_2024-Update
Sobic.002G208700.1	No alias	ligand-gated cation channel *(GLR)	0.04	Orthogroups_2024-Update
Sobic.002G209100.1	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	InterProScan predictions
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:0001932	regulation of protein phosphorylation	IEP	Predicted GO
BP	GO:0005991	trehalose metabolic process	IEP	Predicted GO
BP	GO:0005992	trehalose biosynthetic process	IEP	Predicted GO
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0015098	molybdate ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015689	molybdate ion transport	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predicted GO
MF	GO:0019900	kinase binding	IEP	Predicted GO
MF	GO:0019901	protein kinase binding	IEP	Predicted GO
MF	GO:0030151	molybdenum ion binding	IEP	Predicted GO
BP	GO:0031399	regulation of protein modification process	IEP	Predicted GO
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predicted GO
BP	GO:0042126	nitrate metabolic process	IEP	Predicted GO
BP	GO:0042128	nitrate assimilation	IEP	Predicted GO
BP	GO:0042325	regulation of phosphorylation	IEP	Predicted GO
BP	GO:0043549	regulation of kinase activity	IEP	Predicted GO
BP	GO:0045859	regulation of protein kinase activity	IEP	Predicted GO
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0050790	regulation of catalytic activity	IEP	Predicted GO
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predicted GO
BP	GO:0051338	regulation of transferase activity	IEP	Predicted GO
BP	GO:0065009	regulation of molecular function	IEP	Predicted GO
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:0071941	nitrogen cycle metabolic process	IEP	Predicted GO
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Predicted GO
BP	GO:2001057	reactive nitrogen species metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001638	Solute-binding_3/MltF_N	177	448
IPR001320	Iontro_rcpt	449	484

External Links

No external refs found!

MA_10426811g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation