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Description : (at1g49230 : 115.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49200.1); Has 9168 Blast hits to 9144 proteins in 279 species: Archae - 0; Bacteria - 0; Metazoa - 2452; Fungi - 610; Plants - 4926; Viruses - 41; Other Eukaryotes - 1139 (source: NCBI BLink). & (q9lrb7|el5_orysa : 80.1) E3 ubiquitin-protein ligase EL5 (EC 6.3.2.-) - Oryza sativa (Rice) & (reliability: 230.0) & (original description: no original description)
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_10426834g0010 | |
| Cluster | HCCA clusters: Cluster_122 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_20151 | No alias | putative ring-h2 finger protein atl61 | 0.03 | Orthogroups_2024-Update | |
| A4A49_36944 | No alias | ring-h2 finger protein atl52 | 0.04 | Orthogroups_2024-Update | |
| At5g41450 | No alias | RING/U-box superfamily protein... | 0.02 | Orthogroups_2024-Update | |
| Bradi2g22650 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.B02006.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.G01336.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Brara.G02364.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
| Glyma.04G222300 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G015200 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.19G010400 | No alias | hypoxia-responsive family protein / zinc finger... | 0.04 | Orthogroups_2024-Update | |
| HORVU5Hr1G096480.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os04g37740 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_12352g0010 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
| MA_124750g0010 | No alias | (at5g01880 : 92.8) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| PSME_00034763-RA | No alias | (at5g05280 : 85.1) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| Potri.003G075200 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.011G119900 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Pp1s460_19V6 | No alias | zinc finger | 0.03 | Orthogroups_2024-Update | |
| Seita.3G389400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
| Seita.7G205000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
| Seita.9G336200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G283400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G205400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G231400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc12g087860 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.04 | Orthogroups_2024-Update | |
| Sopen03g031440 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen05g033830 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen09g030100 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen10g005680 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004521 | endoribonuclease activity | IEP | Predicted GO |
| MF | GO:0004540 | ribonuclease activity | IEP | Predicted GO |
| BP | GO:0009308 | amine metabolic process | IEP | Predicted GO |
| BP | GO:0009690 | cytokinin metabolic process | IEP | Predicted GO |
| BP | GO:0010817 | regulation of hormone levels | IEP | Predicted GO |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0033897 | ribonuclease T2 activity | IEP | Predicted GO |
| BP | GO:0034754 | cellular hormone metabolic process | IEP | Predicted GO |
| BP | GO:0042445 | hormone metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 93 | 136 |
| No external refs found! |