1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10426937g0020

MA_10426937g0020


Description : (at4g26090 : 162.0) Encodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2.; RESISTANT TO P. SYRINGAE 2 (RPS2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: RPS5-like 1 (TAIR:AT1G12210.1); Has 21906 Blast hits to 18242 proteins in 683 species: Archae - 18; Bacteria - 1169; Metazoa - 4701; Fungi - 258; Plants - 15223; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (reliability: 322.0) & (original description: no original description)


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10426937g0020
Cluster HCCA clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
At1g12280 No alias Disease resistance protein SUMM2... 0.02 Orthogroups_2024-Update
At1g63350 No alias Disease resistance protein (CC-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At4g27220 No alias NB-ARC domain-containing disease resistance protein... 0.05 Orthogroups_2024-Update
Bradi2g52150 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Brara.K00100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.12G236500 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
MA_879312g0010 No alias (at5g43730 : 88.6) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00026738-RA No alias (at1g61180 : 216.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00027915-RA No alias (at1g15890 : 191.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
Potri.001G313301 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Potri.T003800 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.T026800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.T027300 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.T027700 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 2 141
No external refs found!