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  5. MA_10427099g0010

MA_10427099g0010


Description : (at2g39940 : 141.0) Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.; CORONATINE INSENSITIVE 1 (COI1); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 1742 Blast hits to 1380 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 463; Fungi - 47; Plants - 1165; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 282.0) & (original description: no original description)


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Picea release: MA_10427099g0010
Cluster HCCA clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Brara.C02040.1 No alias component *(COI) of jasmonic acid receptor complex 0.02 Orthogroups_2024-Update
Glyma.06G095400 No alias auxin F-box protein 5 0.03 Orthogroups_2024-Update
Glyma.08G059500 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G050500 No alias auxin signaling F-box 3 0.03 Orthogroups_2024-Update
Glyma.18G030200 No alias RNI-like superfamily protein 0.04 Orthogroups_2024-Update
MA_78902g0010 No alias (at5g49980 : 364.0) auxin F-box protein 5 (AFB5);... 0.03 Orthogroups_2024-Update
PSME_00005246-RA No alias (at3g62980 : 633.0) Encodes an auxin receptor that... 0.02 Orthogroups_2024-Update
PSME_00010803-RA No alias (at2g39940 : 593.0) Encodes a protein containing... 0.03 Orthogroups_2024-Update
PSME_00027400-RA No alias (at2g39940 : 611.0) Encodes a protein containing... 0.02 Orthogroups_2024-Update
Pp1s44_198V6 No alias afb2 gene for auxin signalling f-box protein AFB2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!