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  5. Solyc10g007770

Solyc10g007770


Description : RNA-binding protein, putative (AHRD V3.3 *** B9T754_RICCO)


Gene families : OG_42_0001046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g007770
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
438348 No alias MEI2-like protein 5 0.02 Orthogroups_2024-Update
A4A49_20602 No alias protein mei2-like 2 0.02 Orthogroups_2024-Update
At1g29400 No alias Protein MEI2-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF5] 0.03 Orthogroups_2024-Update
Brara.E00321.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g31290 No alias AML1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g01240 No alias AML1, putative, expressed 0.03 Orthogroups_2024-Update
Solyc05g023740 No alias Arabidopsis mei2-like protein 0.02 Orthogroups_2024-Update
Sopen10g003680 No alias RNA recognition motif 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005542 folic acid binding IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 278 343
IPR000504 RRM_dom 193 257
IPR007201 Mei2-like_Rrm_C 685 781
No external refs found!