MA_10427318g0020

Description : (at3g46040 : 214.0) Regulated by TCP20.; ribosomal protein S15A D (RPS15AD); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8 family protein (TAIR:AT5G59850.1); Has 3503 Blast hits to 3503 proteins in 1362 species: Archae - 277; Bacteria - 1878; Metazoa - 431; Fungi - 223; Plants - 255; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (q9at34|rs15a_dauca : 213.0) 40S ribosomal protein S15a - Daucus carota (Carrot) & (reliability: 428.0) & (original description: no original description)

Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_10427318g0020
Cluster	HCCA clusters: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method
228163	No alias	Ribosomal protein S8 family protein	0.05	Orthogroups_2024-Update
Bradi2g23110	No alias	ribosomal protein S15A	0.07	Orthogroups_2024-Update
Bradi2g54450	No alias	ribosomal protein S15A	0.09	Orthogroups_2024-Update
Brara.B01062.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Brara.C01067.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Brara.F00468.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.08	Orthogroups_2024-Update
Brara.J01354.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Cre05.g234637	No alias	Ribosomal protein S8 family protein	0.09	Orthogroups_2024-Update
GRMZM2G083497	No alias	ribosomal protein S15A	0.04	Orthogroups_2024-Update
Glyma.07G255500	No alias	ribosomal protein S15A	0.03	Orthogroups_2024-Update
Glyma.11G003600	No alias	ribosomal protein S15A	0.03	Orthogroups_2024-Update
Glyma.11G003700	No alias	ribosomal protein S15A	0.03	Orthogroups_2024-Update
Glyma.15G102550	No alias	ribosomal protein S15A	0.06	Orthogroups_2024-Update
Glyma.17G018600	No alias	ribosomal protein S15A	0.06	Orthogroups_2024-Update
HORVU1Hr1G072060.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
HORVU3Hr1G086930.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
LOC_Os07g10720	No alias	40S ribosomal protein S15a, putative, expressed	0.03	Orthogroups_2024-Update
Mp8g13010.1	No alias	component RPS15a of SSU proteome	0.06	Orthogroups_2024-Update
PSME_00001830-RA	No alias	(at5g59850 : 244.0) Ribosomal protein S8 family protein;...	0.05	Orthogroups_2024-Update
PSME_00015526-RA	No alias	(at5g59850 : 244.0) Ribosomal protein S8 family protein;...	0.07	Orthogroups_2024-Update
Potri.001G118100	No alias	ribosomal protein S15A	0.05	Orthogroups_2024-Update
Pp1s115_101V6	No alias	40s ribosomal protein s15a	0.07	Orthogroups_2024-Update
Pp1s1_304V6	No alias	40s ribosomal protein s15a	0.02	Orthogroups_2024-Update
Pp1s426_18V6	No alias	40s ribosomal protein s15a	0.05	Orthogroups_2024-Update
Pp1s45_88V6	No alias	40s ribosomal protein s15a	0.07	Orthogroups_2024-Update
Pp1s61_209V6	No alias	40s ribosomal protein s15a	0.04	Orthogroups_2024-Update
Seita.2G319400.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Seita.5G374600.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Seita.8G174900.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Sobic.003G012700.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Sobic.007G212600.1	No alias	component *(uS8) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Sopen04g025860	No alias	Ribosomal protein S8	0.07	Orthogroups_2024-Update
Sopen04g026010	No alias	Ribosomal protein S8	0.03	Orthogroups_2024-Update
Sopen04g026020	No alias	Ribosomal protein S8	0.09	Orthogroups_2024-Update
evm.model.contig_2045.5	No alias	(at5g59850 : 190.0) Ribosomal protein S8 family protein;...	0.09	Orthogroups_2024-Update
evm.model.tig00000158.110	No alias	(q9at34\|rs15a_dauca : 210.0) 40S ribosomal protein S15a...	0.14	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
BP	GO:0006413	translational initiation	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
BP	GO:0009116	nucleoside metabolic process	IEP	Predicted GO
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	Predicted GO
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
CC	GO:0044437	vacuolar part	IEP	Predicted GO
BP	GO:1901657	glycosyl compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000630	Ribosomal_S8	53	165

External Links

No external refs found!

MA_10427318g0020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation