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  5. MA_10428116g0010

MA_10428116g0010


Description : (at5g12080 : 486.0) mechanosensitive channel of small conductance-like 10 (MSL10); FUNCTIONS IN: mechanically-gated ion channel activity; INVOLVED IN: detection of mechanical stimulus; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Mechanosensitive ion channel MscS (InterPro:IPR006685); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 9 (TAIR:AT5G19520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 972.0) & (original description: no original description)


Gene families : OG_42_0000648 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10428116g0010
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
A4A49_27673 No alias mechanosensitive ion channel protein 10 0.02 Orthogroups_2024-Update
Cre12.g505800 No alias Mechanosensitive ion channel family protein 0.02 Orthogroups_2024-Update
LOC_Os06g10410 No alias uncharacterized mscS family protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00031352-RA No alias (at1g78610 : 734.0) mechanosensitive channel of small... 0.05 Orthogroups_2024-Update
PSME_00046328-RA No alias (at3g14810 : 231.0) mechanosensitive channel of small... 0.07 Orthogroups_2024-Update
Sopen04g035690 No alias Mechanosensitive ion channel 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006685 MscS_channel 580 785
No external refs found!