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  5. MA_10428315g0010

MA_10428315g0010


Description : (at1g34370 : 211.0) Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity.; sensitive to proton rhizotoxicity 1 (STOP1); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G22890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description)


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10428315g0010
Cluster HCCA clusters: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
A4A49_07606 No alias protein shoot gravitropism 5 0.02 Orthogroups_2024-Update
At1g55110 No alias Protein indeterminate-domain 7... 0.02 Orthogroups_2024-Update
Bradi1g68730 No alias indeterminate(ID)-domain 14 0.02 Orthogroups_2024-Update
Bradi5g18530 No alias indeterminate(ID)-domain 4 0.02 Orthogroups_2024-Update
Brara.G02764.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Glyma.13G139000 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Potri.005G027200 No alias indeterminate(ID)-domain 2 0.04 Orthogroups_2024-Update
Potri.005G125600 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Potri.010G101200 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Potri.013G019200 No alias indeterminate(ID)-domain 2 0.02 Orthogroups_2024-Update
Potri.T034600 No alias indeterminate(ID)-domain 2 0.02 Orthogroups_2024-Update
Pp1s43_228V6 No alias nucleic acid binding 0.03 Orthogroups_2024-Update
Sobic.002G293000.2 No alias C2H2 subclass IDD transcription factor 0.04 Orthogroups_2024-Update
Sobic.003G417500.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!