MA_10428416g0010


Description : (at1g53210 : 127.0) sodium/calcium exchanger family protein / calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Sodium/calcium exchanger membrane region (InterPro:IPR004837), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G29020.1); Has 622 Blast hits to 603 proteins in 166 species: Archae - 12; Bacteria - 69; Metazoa - 8; Fungi - 194; Plants - 285; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description)


Gene families : OG_42_0001514 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10428416g0010
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
76965 No alias sodium/calcium exchanger family protein /... 0.03 Orthogroups_2024-Update
Glyma.12G227800 No alias sodium/calcium exchanger family protein /... 0.03 Orthogroups_2024-Update
Potri.001G375300 No alias sodium/calcium exchanger family protein /... 0.02 Orthogroups_2024-Update
Potri.001G375400 No alias sodium/calcium exchanger family protein /... 0.02 Orthogroups_2024-Update
Sopen07g030930 No alias Sodium/calcium exchanger protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 127 205
IPR002048 EF_hand_dom 5 70
No external refs found!