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  5. MA_10428528g0010

MA_10428528g0010


Description : (at3g04720 : 124.0) Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.; pathogenesis-related 4 (PR4); FUNCTIONS IN: chitin binding; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin (InterPro:IPR001153), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726), Barwin-related endoglucanase (InterPro:IPR009009), Chitin-binding, type 1, conserved site (InterPro:IPR018371), Barwin-like endoglucanase (InterPro:IPR014733), Barwin, conserved site (InterPro:IPR018226), Chitin-binding, type 1 (InterPro:IPR001002); BEST Arabidopsis thaliana protein match is: basic chitinase (TAIR:AT3G12500.1); Has 1702 Blast hits to 1458 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 253; Plants - 1414; Viruses - 10; Other Eukaryotes - 25 (source: NCBI BLink). & (p83343|pr4_prupe : 122.0) Pathogenesis-related protein PR-4 (PpAz89) (Fragment) - Prunus persica (Peach) & (reliability: 248.0) & (original description: no original description)


Gene families : OG_42_0001762 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001762_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10428528g0010
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
At3g04720 No alias Hevein-like preproprotein... 0.04 Orthogroups_2024-Update
Brara.C03072.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G117971 No alias pathogenesis-related 4 0.05 Orthogroups_2024-Update
HORVU3Hr1G113120.2 No alias Unknown function 0.07 Orthogroups_2024-Update
HORVU3Hr1G113620.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os11g37960 No alias WIP4 - Wound-induced protein precursor, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g37970 No alias WIP5 - Wound-induced protein precursor, expressed 0.02 Orthogroups_2024-Update
MA_10434174g0010 No alias (p29063|pr4b_tobac : 207.0) Pathogenesis-related protein... 0.06 Orthogroups_2024-Update
MA_8035959g0010 No alias (p29063|pr4b_tobac : 191.0) Pathogenesis-related protein... 0.06 Orthogroups_2024-Update
Mp2g21910.1 No alias Hevein-like preproprotein OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
PSME_00007895-RA No alias (p29063|pr4b_tobac : 193.0) Pathogenesis-related protein... 0.06 Orthogroups_2024-Update
PSME_00009548-RA No alias (p29063|pr4b_tobac : 131.0) Pathogenesis-related protein... 0.07 Orthogroups_2024-Update
PSME_00054279-RA No alias (p09761|win1_soltu : 201.0) Wound-induced protein WIN1... 0.07 Orthogroups_2024-Update
Potri.013G041700 No alias pathogenesis-related 4 0.03 Orthogroups_2024-Update
Seita.8G169900.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.8G170000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.8G170100.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.005G157400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G169200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G169400.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc01g097280 No alias Pathogenesis-related protein PR-4 (AHRD V3.3 *** PR4_PRUPE) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0042742 defense response to bacterium IEA InterProScan predictions
BP GO:0050832 defense response to fungus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001153 Barwin_dom 33 148
No external refs found!