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  5. MA_10428555g0010

MA_10428555g0010


Description : (at5g59970 : 161.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 161.0) Histone H4 - Pisum sativum (Garden pea) & (reliability: 322.0) & (original description: no original description)


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10428555g0010
Cluster HCCA clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
A4A49_57227 No alias histone h4 0.03 Orthogroups_2024-Update
A4A49_58366 No alias histone h4 0.03 Orthogroups_2024-Update
A4A49_61887 No alias histone h4 0.03 Orthogroups_2024-Update
A4A49_64267 No alias histone h4 0.03 Orthogroups_2024-Update
AC196961.2_FG003 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
AC212565.3_FG001 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
AC233865.1_FG001 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
At1g07820 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.04 Orthogroups_2024-Update
At3g53730 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.03 Orthogroups_2024-Update
At5g59690 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.03 Orthogroups_2024-Update
Brara.G01399.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.H02899.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.I03658.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Brara.I05338.1 No alias histone *(H4) 0.05 Orthogroups_2024-Update
Cre06.g265050 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g265200 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g268400 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g274900 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g275700 No alias histone H4 0.04 Orthogroups_2024-Update
Cre12.g504850 No alias histone H4 0.05 Orthogroups_2024-Update
Cre17.g708650 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G084195 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G143780 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G149178 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G421279 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.02G224100 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.11G146481 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G177800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G178100 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.15G043200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G063200 No alias histone H4 0.03 Orthogroups_2024-Update
HORVU6Hr1G011710.1 No alias histone *(H4) 0.05 Orthogroups_2024-Update
Kfl00106_g14 kfl00106_g14_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Pp1s259_63V6 No alias histone h4 0.03 Orthogroups_2024-Update
Pp1s83_240V6 No alias histone h4 0.03 Orthogroups_2024-Update
Sobic.002G210500.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Solyc04g011390 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc05g054610 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc06g005420 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc06g075930 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc06g075960 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc11g066160 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Sopen04g005580 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g001390 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen06g001400 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g032380 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 104 162
No external refs found!