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  5. MA_10428849g0010

MA_10428849g0010


Description : (at5g65560 : 428.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G77340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 351.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 856.0) & (original description: no original description)


Gene families : OG_42_0001457 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001457_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10428849g0010
Cluster HCCA clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Seita.5G077300.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 15 45
IPR002885 Pentatricopeptide_repeat 656 684
IPR002885 Pentatricopeptide_repeat 252 282
IPR002885 Pentatricopeptide_repeat 554 611
IPR002885 Pentatricopeptide_repeat 500 545
IPR002885 Pentatricopeptide_repeat 54 103
IPR002885 Pentatricopeptide_repeat 194 243
IPR002885 Pentatricopeptide_repeat 286 335
IPR002885 Pentatricopeptide_repeat 356 405
IPR002885 Pentatricopeptide_repeat 133 173
IPR002885 Pentatricopeptide_repeat 429 475
No external refs found!