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Description : (at2g39940 : 603.0) Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.; CORONATINE INSENSITIVE 1 (COI1); BEST Arabidopsis thaliana protein match is: GRR1-like protein 1 (TAIR:AT4G03190.1); Has 1742 Blast hits to 1380 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 463; Fungi - 47; Plants - 1165; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 1206.0) & (original description: no original description)
Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_10428988g0010 | |
| Cluster | HCCA clusters: Cluster_136 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_32073 | No alias | transport inhibitor response 1-like protein | 0.03 | Orthogroups_2024-Update | |
| Brara.A01445.1 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G079112 | No alias | RNI-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.04G093500 | No alias | auxin F-box protein 5 | 0.02 | Orthogroups_2024-Update | |
| Glyma.14G062100 | No alias | RNI-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s44_198V6 | No alias | afb2 gene for auxin signalling f-box protein AFB2 | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004519 | endonuclease activity | IEP | Predicted GO |
| MF | GO:0004521 | endoribonuclease activity | IEP | Predicted GO |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Predicted GO |
| MF | GO:0004540 | ribonuclease activity | IEP | Predicted GO |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |