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  5. MA_10429029g0010

MA_10429029g0010


Description : (at5g53550 : 696.0) YELLOW STRIPE like 3 (YSL3); CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 2 (TAIR:AT5G24380.1). & (reliability: 1280.0) & (original description: no original description)


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10429029g0010
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Bradi5g08250 No alias YELLOW STRIPE like 6 0.03 Orthogroups_2024-Update
Bradi5g17220 No alias YELLOW STRIPE like 3 0.02 Orthogroups_2024-Update
Bradi5g17230 No alias YELLOW STRIPE like 2 0.02 Orthogroups_2024-Update
GRMZM2G024196 No alias YELLOW STRIPE like 7 0.03 Orthogroups_2024-Update
HORVU2Hr1G108400.2 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
LOC_Os04g32050 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
PSME_00021866-RA No alias (at3g27020 : 523.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
PSME_00023827-RA No alias (at1g65730 : 894.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
PSME_00036873-RA No alias (at1g65730 : 901.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Pp1s2_335V6 No alias oligopeptide transporter opt family 0.02 Orthogroups_2024-Update
Seita.1G244400.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Seita.1G254200.1 No alias iron chelator transporter *(YSL) & ferric... 0.04 Orthogroups_2024-Update
Sobic.004G299700.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Solyc03g031920 No alias Oligopeptide transporter, putative (AHRD V3.3 *** B9SIR4_RICCO) 0.02 Orthogroups_2024-Update
Solyc03g082620 No alias Yellow stripe 1A transporter (AHRD V3.3 *** A0A0K9P9K5_ZOSMR) 0.02 Orthogroups_2024-Update
Solyc09g074960 No alias Yellow stripe 1A transporter (AHRD V3.3 *** A0A0K9P9K5_ZOSMR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 71 600
IPR004813 OPT 605 698
No external refs found!