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  5. Solyc10g008710

Solyc10g008710


Description : GDSL esterase/lipase family (AHRD V3.3 *** A0A151RL65_CAJCA)


Gene families : OG_42_0000085 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g008710
Cluster HCCA clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g11910 No alias GDSL-like lipase/acylhydrolase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g43100 No alias GDSL-like lipase/acylhydrolase, putative, expressed 0.03 Orthogroups_2024-Update
Mp7g13650.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00034673-RA No alias (at1g28590 : 278.0) GDSL-like Lipase/Acylhydrolase... 0.01 Orthogroups_2024-Update
PSME_00042850-RA No alias (at5g45910 : 264.0) GDSL-like Lipase/Acylhydrolase... 0.02 Orthogroups_2024-Update
Seita.5G150700.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.5G245600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen03g002250 No alias GDSL-like Lipase/Acylhydrolase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001087 GDSL 30 350
No external refs found!