Description : (at1g67440 : 172.0) embryo defective 1688 (emb1688); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), EngC GTPase (InterPro:IPR010914), GTPase EngC (InterPro:IPR004881); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT1G67460.1); Has 5395 Blast hits to 5393 proteins in 2047 species: Archae - 18; Bacteria - 4575; Metazoa - 3; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 734 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description)
Gene families : OG_42_0004390 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004390_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_10429429g0010 | |
Cluster | HCCA clusters: Cluster_156 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Solyc05g015310 | No alias | Minichromosome maintenance (MCM2/3/5) family protein... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | InterProScan predictions |
MF | GO:0005525 | GTP binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003830 | beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | IEP | Predicted GO |
MF | GO:0004540 | ribonuclease activity | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006487 | protein N-linked glycosylation | IEP | Predicted GO |
BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Predicted GO |
CC | GO:0009521 | photosystem | IEP | Predicted GO |
CC | GO:0009523 | photosystem II | IEP | Predicted GO |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predicted GO |
BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
CC | GO:0019898 | extrinsic component of membrane | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
CC | GO:0044436 | thylakoid part | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
CC | GO:1990204 | oxidoreductase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR010914 | RsgA_GTPase_dom | 198 | 260 |
No external refs found! |