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  5. Solyc01g095260

Solyc01g095260


Description : Acidic endochitinase (AHRD V3.3 *** W9R015_9ROSA)


Gene families : OG_42_0000663 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g095260
Cluster HCCA clusters: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
A4A49_40427 No alias hevamine-a 0.04 Orthogroups_2024-Update
Bradi2g55620 No alias chitinase A 0.03 Orthogroups_2024-Update
LOC_Os01g47070 No alias glycosyl hydrolase, putative, expressed 0.02 Orthogroups_2024-Update
Mp2g03650.1 No alias Acidic endochitinase SE2 OS=Beta vulgaris... 0.03 Orthogroups_2024-Update
Potri.014G092800 No alias chitinase A 0.02 Orthogroups_2024-Update
Sobic.003G364300.1 No alias acidic chitinase *(CHIA) 0.03 Orthogroups_2024-Update
Sopen01g039040 No alias Glycosyl hydrolases family 18 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 28 281
No external refs found!