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  5. Solyc10g009050

Solyc10g009050


Description : DUF616 family protein (AHRD V3.3 *** A0A072UMP6_MEDTR)


Gene families : OG_42_0002258 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002258_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g009050
Cluster HCCA clusters: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G076170.1 No alias glycosyltransferase *(MUCI70) 0.04 Orthogroups_2024-Update
PSME_00024190-RA No alias (at1g28240 : 597.0) Protein of unknown function... 0.02 Orthogroups_2024-Update
Solyc07g063150 No alias DUF616 family protein (AHRD V3.3 *** G7IRA5_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006852 DUF616 151 457
No external refs found!