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Description : (at2g35930 : 192.0) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.; plant U-box 23 (PUB23); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1); Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0; Bacteria - 34; Metazoa - 243; Fungi - 89; Plants - 1910; Viruses - 3; Other Eukaryotes - 222 (source: NCBI BLink). & (reliability: 384.0) & (original description: no original description)
Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_10430196g0010 | |
| Cluster | HCCA clusters: Cluster_88 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_38562 | No alias | u-box domain-containing protein 27 | 0.03 | Orthogroups_2024-Update | |
| Brara.E02898.1 | No alias | E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Glyma.12G188900 | No alias | plant U-box 23 | 0.03 | Orthogroups_2024-Update | |
| HORVU4Hr1G064070.1 | No alias | E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G077120.1 | No alias | E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g33590 | No alias | U-box domain-containing protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| Potri.009G016200 | No alias | plant U-box 23 | 0.03 | Orthogroups_2024-Update | |
| Sobic.006G274933.1 | No alias | E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Solyc01g080920 | No alias | LOW QUALITY:U-box domain-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc06g074140 | No alias | LOW QUALITY:U-box domain-containing family protein (AHRD... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Predicted GO |
| MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Predicted GO |
| BP | GO:0016197 | endosomal transport | IEP | Predicted GO |
| BP | GO:0016482 | cytosolic transport | IEP | Predicted GO |
| MF | GO:0030246 | carbohydrate binding | IEP | Predicted GO |
| CC | GO:0030906 | retromer, cargo-selective complex | IEP | Predicted GO |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Predicted GO |
| BP | GO:0046834 | lipid phosphorylation | IEP | Predicted GO |
| BP | GO:0046854 | phosphatidylinositol phosphorylation | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |