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  5. MA_10430480g0010

MA_10430480g0010


Description : (at1g53840 : 94.4) encodes a pectin methylesterase; pectin methylesterase 1 (PME1); FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: extracellular region, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectinesterase family protein (TAIR:AT3G14300.1); Has 3031 Blast hits to 2961 proteins in 324 species: Archae - 8; Bacteria - 582; Metazoa - 1; Fungi - 194; Plants - 2221; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 188.8) & (original description: no original description)


Gene families : OG_42_0000479 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10430480g0010
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Brara.B01931.1 No alias pectin methylesterase inhibitor 0.03 Orthogroups_2024-Update
Solyc12g009270 No alias Plant invertase/pectin methylesterase inhibitor... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 68 209
IPR006501 Pectinesterase_inhib_dom 208 273
No external refs found!