Description : Dof zinc finger protein (AHRD V3.3 *** W9RTF5_9ROSA)
Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc10g009360 | |
Cluster | HCCA clusters: Cluster_5 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_32286 | No alias | cyclic dof factor 2 | 0.02 | Orthogroups_2024-Update | |
Glyma.13G237600 | No alias | TARGET OF MONOPTEROS 6 | 0.03 | Orthogroups_2024-Update | |
Pp1s341_43V6 | No alias | f-box family protein | 0.03 | Orthogroups_2024-Update | |
Seita.5G324400.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
Seita.7G202300.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
Sopen06g026650 | No alias | Dof domain, zinc finger | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0004180 | carboxypeptidase activity | IEP | Predicted GO |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Predicted GO |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Predicted GO |
CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
BP | GO:0006508 | proteolysis | IEP | Predicted GO |
MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
MF | GO:0043531 | ADP binding | IEP | Predicted GO |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Predicted GO |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | Predicted GO |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003851 | Znf_Dof | 90 | 147 |
No external refs found! |