Description : (at1g02060 : 558.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G37230.1); Has 43508 Blast hits to 14040 proteins in 293 species: Archae - 4; Bacteria - 48; Metazoa - 396; Fungi - 632; Plants - 41173; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (q76c99|rf1_orysa : 218.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1116.0) & (original description: no original description)
Gene families : OG_42_0007606 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007606_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_10431553g0010 | |
Cluster | HCCA clusters: Cluster_119 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
BP | GO:0006281 | DNA repair | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
MF | GO:0051287 | NAD binding | IEP | Predicted GO |
BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 150 | 179 |
IPR002885 | Pentatricopeptide_repeat | 248 | 279 |
IPR002885 | Pentatricopeptide_repeat | 181 | 229 |
IPR002885 | Pentatricopeptide_repeat | 504 | 552 |
IPR002885 | Pentatricopeptide_repeat | 358 | 405 |
IPR002885 | Pentatricopeptide_repeat | 437 | 483 |
IPR002885 | Pentatricopeptide_repeat | 288 | 337 |
IPR002885 | Pentatricopeptide_repeat | 642 | 684 |
No external refs found! |