- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : (at2g14740 : 651.0) Encodes a vacuolar sorting receptor that participates in vacuolar sorting in vegetative tissues and in seeds.; vaculolar sorting receptor 3 (VSR3); FUNCTIONS IN: calcium ion binding; INVOLVED IN: intracellular protein transport, protein targeting to vacuole; LOCATED IN: integral to plasma membrane, Golgi transport complex, membrane; EXPRESSED IN: callus, leaf; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-like (InterPro:IPR006210), Growth factor, receptor (InterPro:IPR009030), EGF-like region, conserved site (InterPro:IPR013032); BEST Arabidopsis thaliana protein match is: vacuolar sorting receptor 4 (TAIR:AT2G14720.2); Has 14459 Blast hits to 6347 proteins in 253 species: Archae - 2; Bacteria - 131; Metazoa - 13188; Fungi - 10; Plants - 479; Viruses - 0; Other Eukaryotes - 649 (source: NCBI BLink). & (p93484|vsr1_pea : 637.0) Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) - Pisum sativum (Garden pea) & (reliability: 1302.0) & (original description: no original description)
Gene families : OG_42_0000754 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000754_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_10432052g0010 | |
| Cluster | HCCA clusters: Cluster_233 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi5g21370 | No alias | VACUOLAR SORTING RECEPTOR 6 | 0.05 | Orthogroups_2024-Update | |
| LOC_Os06g45380 | No alias | vacuolar-sorting receptor precursor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| Pp1s76_79V6 | No alias | zinc finger | 0.02 | Orthogroups_2024-Update | |
| Seita.4G186000.1 | No alias | lytic vacuole protein sorting receptor *(VSR) | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G381200.1 | No alias | lytic vacuole protein sorting receptor *(VSR) & signal... | 0.04 | Orthogroups_2024-Update | |
| Sobic.006G211300.1 | No alias | lytic vacuole protein sorting receptor *(VSR) | 0.05 | Orthogroups_2024-Update | |
| Sobic.010G219800.1 | No alias | lytic vacuole protein sorting receptor *(VSR) | 0.04 | Orthogroups_2024-Update | |
| Solyc10g074980 | No alias | Vacuolar sorting receptor family protein (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001871 | pattern binding | IEP | Predicted GO |
| MF | GO:0004421 | hydroxymethylglutaryl-CoA synthase activity | IEP | Predicted GO |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Predicted GO |
| BP | GO:0006479 | protein methylation | IEP | Predicted GO |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
| BP | GO:0006732 | coenzyme metabolic process | IEP | Predicted GO |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Predicted GO |
| BP | GO:0008213 | protein alkylation | IEP | Predicted GO |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008987 | quinolinate synthetase A activity | IEP | Predicted GO |
| BP | GO:0009108 | coenzyme biosynthetic process | IEP | Predicted GO |
| BP | GO:0009435 | NAD biosynthetic process | IEP | Predicted GO |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Predicted GO |
| BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
| BP | GO:0016570 | histone modification | IEP | Predicted GO |
| BP | GO:0016571 | histone methylation | IEP | Predicted GO |
| MF | GO:0016740 | transferase activity | IEP | Predicted GO |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Predicted GO |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predicted GO |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Predicted GO |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Predicted GO |
| BP | GO:0019674 | NAD metabolic process | IEP | Predicted GO |
| MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| BP | GO:0034968 | histone lysine methylation | IEP | Predicted GO |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Predicted GO |
| BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
| MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Predicted GO |
| BP | GO:0051186 | cofactor metabolic process | IEP | Predicted GO |
| BP | GO:0051188 | cofactor biosynthetic process | IEP | Predicted GO |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003137 | PA_domain | 66 | 168 |
| No external refs found! |