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  5. MA_10432162g0020

MA_10432162g0020


Description : (at4g02750 : 463.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 162.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 926.0) & (original description: no original description)


Gene families : OG_42_0010200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10432162g0020
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
MA_119519g0010 No alias (at4g37170 : 530.0) Pentatricopeptide repeat (PPR)... 0.11 Orthogroups_2024-Update
PSME_00006940-RA No alias (at3g12770 : 488.0) Encodes a pentatricopeptide repeat... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 254 283
IPR002885 Pentatricopeptide_repeat 521 544
IPR002885 Pentatricopeptide_repeat 195 222
IPR002885 Pentatricopeptide_repeat 97 121
IPR002885 Pentatricopeptide_repeat 223 252
IPR002885 Pentatricopeptide_repeat 285 312
IPR002885 Pentatricopeptide_repeat 446 494
IPR002885 Pentatricopeptide_repeat 344 392
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 22 69
No external refs found!