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  5. MA_10432509g0020

MA_10432509g0020


Description : (q8w0w3|tf2b_orysa : 230.0) Transcription initiation factor IIB (General transcription factor TFIIB) - Oryza sativa (Rice) & (at3g10330 : 218.0) Cyclin-like family protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation, regulation of transcription; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-related (InterPro:IPR013763), Zinc finger, TFIIB-type (InterPro:IPR013137), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1989 Blast hits to 1976 proteins in 358 species: Archae - 539; Bacteria - 1; Metazoa - 303; Fungi - 308; Plants - 195; Viruses - 12; Other Eukaryotes - 631 (source: NCBI BLink). & (reliability: 436.0) & (original description: no original description)


Gene families : OG_42_0001498 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001498_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10432509g0020
Cluster HCCA clusters: Cluster_265


Type GO Term Name Evidence Source
MF GO:0017025 TBP-class protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0045926 negative regulation of growth IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
InterPro domains Description Start Stop
IPR013150 TFIIB_cyclin 7 70
No external refs found!