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  5. MA_10432538g0010

MA_10432538g0010


Description : (at1g19510 : 110.0) RAD-like 5 (RL5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: RAD-like 6 (TAIR:AT1G75250.2); Has 606 Blast hits to 606 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 0; Plants - 454; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)


Gene families : OG_42_0000581 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000581_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10432538g0010
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
At2g21650 No alias RSM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZA8] 0.04 Orthogroups_2024-Update
Brara.G00192.1 No alias MYB-RELATED transcription factor *(RADIALIS) 0.03 Orthogroups_2024-Update
Glyma.02G055800 No alias RAD-like 6 0.02 Orthogroups_2024-Update
Glyma.03G125000 No alias RAD-like 1 0.03 Orthogroups_2024-Update
Glyma.12G042900 No alias RAD-like 1 0.05 Orthogroups_2024-Update
Glyma.16G138400 No alias RAD-like 6 0.02 Orthogroups_2024-Update
HORVU1Hr1G089560.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen01g051880 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 7 51
No external refs found!