1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10433058g0020

MA_10433058g0020


Description : (p50346|rla0_soybn : 423.0) 60S acidic ribosomal protein P0 - Glycine max (Soybean) & (at2g40010 : 419.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813), Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G09200.1); Has 1619 Blast hits to 1617 proteins in 478 species: Archae - 322; Bacteria - 4; Metazoa - 504; Fungi - 295; Plants - 181; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (reliability: 838.0) & (original description: no original description)


Gene families : OG_42_0002448 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002448_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10433058g0020
Cluster HCCA clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Bradi3g14340 No alias Ribosomal protein L10 family protein 0.04 Orthogroups_2024-Update
Brara.A03571.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.C02046.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.C03284.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.E03102.1 No alias component *(uL10) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Cre12.g520500 No alias Ribosomal protein L10 family protein 0.02 Orthogroups_2024-Update
Glyma.02G255500 No alias Ribosomal protein L10 family protein 0.06 Orthogroups_2024-Update
Potri.008G066200 No alias Ribosomal protein L10 family protein 0.04 Orthogroups_2024-Update
Solyc05g054580 No alias 60S acidic ribosomal protein P0 (AHRD V3.3 *** K4C2D6_SOLLC) 0.03 Orthogroups_2024-Update
Sopen05g033060 No alias 60s Acidic ribosomal protein 0.04 Orthogroups_2024-Update
evm.model.contig_3715.5 No alias (o24573|rla0_maize : 264.0) 60S acidic ribosomal protein... 0.02 Orthogroups_2024-Update
evm.model.tig00000615.69 No alias (p41095|rla0_orysa : 288.0) 60S acidic ribosomal protein... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA InterProScan predictions
BP GO:0042254 ribosome biogenesis IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 8 108
No external refs found!