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MA_104339g0010


Description : (at4g23820 : 575.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Glycoside hydrolase, family 28 (InterPro:IPR000743), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G41870.1); Has 4183 Blast hits to 4168 proteins in 506 species: Archae - 6; Bacteria - 1472; Metazoa - 14; Fungi - 1146; Plants - 1414; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). & (p35336|pglr_actch : 108.0) Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 1150.0) & (original description: no original description)


Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_104339g0010
Cluster HCCA clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
A4A49_22271 No alias putative polygalacturonase 0.04 Orthogroups_2024-Update
Glyma.19G213400 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os03g03350 No alias polygalacturonase, putative, expressed 0.03 Orthogroups_2024-Update
Seita.3G126500.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Solyc06g009790 No alias Pectin lyase-like superfamily protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 157 439
No external refs found!