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  5. Solyc10g017890

Solyc10g017890


Description : Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *-* PSAA_POPAL)


Gene families : OG_42_0000633 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000633_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g017890
Cluster HCCA clusters: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
236842 No alias Photosystem I, PsaA/PsaB protein 0.02 Orthogroups_2024-Update
Bradi1g39223 No alias Photosystem I, PsaA/PsaB protein 0.07 Orthogroups_2024-Update
Brara.A02576.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G049200.2 No alias apoprotein PsaA of PS-I complex 0.05 Orthogroups_2024-Update
LOC_Os05g01675 No alias photosystem I P700 chlorophyll a apoprotein A1,... 0.04 Orthogroups_2024-Update
LOC_Os10g38234 No alias photosystem I P700 chlorophyll a apoprotein A2,... 0.04 Orthogroups_2024-Update
Seita.J011100.1 No alias apoprotein PsaA of PS-I complex 0.05 Orthogroups_2024-Update
Seita.J019800.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.008G120266.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc09g015300 No alias Photosystem I P700 chlorophyll a apoprotein A1 (AHRD... 0.03 Orthogroups_2024-Update
Sopen10g009190 No alias Photosystem I psaA/psaB protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009579 thylakoid IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0005342 organic acid transmembrane transporter activity IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015171 amino acid transmembrane transporter activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 240 314
IPR001280 PSI_PsaA/B 117 186
IPR001280 PSI_PsaA/B 192 239
IPR001280 PSI_PsaA/B 51 120
No external refs found!