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  5. MA_10434303g0010

MA_10434303g0010


Description : (at5g59310 : 107.0) Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 4 (LTP4); FUNCTIONS IN: lipid binding; INVOLVED IN: response to water deprivation, response to abscisic acid stimulus, lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 3 (TAIR:AT5G59320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q39950|nltp_helan : 103.0) Nonspecific lipid-transfer protein precursor (LTP) (NsLTP) (SDI-9) - Helianthus annuus (Common sunflower) & (reliability: 214.0) & (original description: no original description)


Gene families : OG_42_0000142 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10434303g0010
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Bradi4g25750 No alias lipid transfer protein 12 0.02 Orthogroups_2024-Update
Brara.C03306.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.C04371.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.E00678.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os11g24070 No alias LTPL10 - Protease inhibitor/seed storage/LTP family... 0.03 Orthogroups_2024-Update
MA_209545g0010 No alias (q39950|nltp_helan : 104.0) Nonspecific lipid-transfer... 0.04 Orthogroups_2024-Update
MA_707397g0010 No alias (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00024120-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00045893-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00057139-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.011G022200 No alias lipid transfer protein 12 0.03 Orthogroups_2024-Update
Seita.7G301200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G013500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc06g005770 No alias Non-specific lipid-transfer protein (AHRD V3.3 *** K4C359_SOLLC) 0.04 Orthogroups_2024-Update
Solyc10g075070 No alias Non-specific lipid-transfer protein (AHRD V3.3 *** K4D1U9_SOLLC) 0.03 Orthogroups_2024-Update
Solyc10g075150 No alias Non-specific lipid-transfer protein (AHRD V3.3 *** M1AVB3_SOLTU) 0.03 Orthogroups_2024-Update
Sopen09g010450 No alias Protease inhibitor/seed storage/LTP family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 37 122
No external refs found!