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  5. Solyc10g017980

Solyc10g017980


Description : Chitinase (AHRD V3.3 *-* B8QVJ5_ZEAMP)


Gene families : OG_42_0002138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g017980
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g09390 No alias HEV3 - Hevein family protein precursor, expressed 0.03 Orthogroups_2024-Update
Pp1s171_80V6 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0044030 regulation of DNA methylation IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 25 62
No external refs found!