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  5. MA_10434417g0010

MA_10434417g0010


Description : (at1g80260 : 575.0) embryo defective 1427 (emb1427); FUNCTIONS IN: tubulin binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: spindle pole, microtubule organizing center; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G20570.1); Has 1146 Blast hits to 1005 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 250; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (reliability: 1150.0) & (original description: no original description)


Gene families : OG_42_0003932 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003932_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10434417g0010
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
PSME_00031820-RA No alias (at1g80260 : 133.0) embryo defective 1427 (emb1427);... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043015 gamma-tubulin binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!