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  5. MA_10434741g0010

MA_10434741g0010


Description : (at5g25460 : 281.0) Protein of unknown function, DUF642; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G11420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 562.0) & (original description: no original description)


Gene families : OG_42_0000355 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000355_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10434741g0010
Cluster HCCA clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Bradi5g14470 No alias Protein of unknown function, DUF642 0.02 Orthogroups_2024-Update
Glyma.06G070900 No alias Protein of unknown function, DUF642 0.04 Orthogroups_2024-Update
PSME_00019733-RA No alias (at5g11420 : 473.0) FUNCTIONS IN: molecular_function... 0.03 Orthogroups_2024-Update
PSME_00024031-RA No alias (at5g25460 : 494.0) Protein of unknown function, DUF642;... 0.03 Orthogroups_2024-Update
Potri.006G050400 No alias Protein of unknown function, DUF642 0.03 Orthogroups_2024-Update
Sopen06g025190 No alias Protein of unknown function (DUF642) 0.06 Orthogroups_2024-Update
Sopen08g020980 No alias Protein of unknown function (DUF642) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006946 DUF642 168 334
IPR006946 DUF642 1 49
No external refs found!