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  5. MA_10434986g0010

MA_10434986g0010


Description : (at4g08350 : 1091.0) global transcription factor group A2 (GTA2); FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity; INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription elongation factor Spt5 (InterPro:IPR017071), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5 (TAIR:AT2G34210.1); Has 14630 Blast hits to 9620 proteins in 607 species: Archae - 121; Bacteria - 647; Metazoa - 6069; Fungi - 2592; Plants - 1061; Viruses - 307; Other Eukaryotes - 3833 (source: NCBI BLink). & (reliability: 2182.0) & (original description: no original description)


Gene families : OG_42_0003156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003156_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Picea release: MA_10434986g0010
Cluster HCCA clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Bradi1g46230 No alias global transcription factor group A2 0.06 Orthogroups_2024-Update
Cre01.g031050 No alias global transcription factor group A2 0.02 Orthogroups_2024-Update
Glyma.04G240900 No alias global transcription factor group A2 0.05 Orthogroups_2024-Update
Glyma.06G122500 No alias global transcription factor group A2 0.06 Orthogroups_2024-Update
HORVU7Hr1G035280.2 No alias component *(SPT5) of SPT4/5 transcription elongation... 0.02 Orthogroups_2024-Update
Kfl00017_0540 kfl00017_0540_v1.1 (at4g08350 : 625.0) global transcription factor group A2... 0.04 Orthogroups_2024-Update
Potri.004G162500 No alias global transcription factor group A2 0.03 Orthogroups_2024-Update
Seita.4G084400.1 No alias component *(SPT5) of SPT4/5 transcription elongation... 0.04 Orthogroups_2024-Update
Sobic.010G078900.1 No alias component *(SPT5) of SPT4/5 transcription elongation... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR005100 NGN-domain 167 251
IPR005824 KOW 467 495
IPR022581 Spt5_N 74 161
No external refs found!