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  5. MA_10435430g0020

MA_10435430g0020


Description : (at5g57450 : 176.0) Involved in homologous recombination and recombinational repair, mutants are sterile, hypersensitive to DNA crosslinking agents, show aberrant meiosis with extensive chromosome fragmentation; homolog of X-ray repair cross complementing 3 (XRCC3) (XRCC3); CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: RAS associated with diabetes protein 51C (TAIR:AT2G45280.1); Has 2317 Blast hits to 2308 proteins in 507 species: Archae - 430; Bacteria - 4; Metazoa - 689; Fungi - 429; Plants - 393; Viruses - 0; Other Eukaryotes - 372 (source: NCBI BLink). & (reliability: 352.0) & (original description: no original description)


Gene families : OG_42_0008574 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008574_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10435430g0020
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Brara.C01193.1 No alias component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.08 Orthogroups_2024-Update
Solyc07g055170 No alias DNA repair Rad51-like protein (AHRD V3.3 *** A0A072V7S1_MEDTR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013632 DNA_recomb/repair_Rad51_C 513 715
IPR013632 DNA_recomb/repair_Rad51_C 22 97
No external refs found!