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Description : (at3g61170 : 382.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1); Has 48118 Blast hits to 13655 proteins in 239 species: Archae - 0; Bacteria - 10; Metazoa - 89; Fungi - 49; Plants - 47457; Viruses - 0; Other Eukaryotes - 513 (source: NCBI BLink). & (q76c99|rf1_orysa : 134.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 764.0) & (original description: no original description)
Gene families : OG_42_0022142 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_10435561g0030 | |
| Cluster | HCCA clusters: Cluster_149 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005216 | ion channel activity | IEP | Predicted GO |
| BP | GO:0006281 | DNA repair | IEP | Predicted GO |
| BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Predicted GO |
| MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
| BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
| BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 357 | 405 |
| IPR002885 | Pentatricopeptide_repeat | 164 | 211 |
| IPR002885 | Pentatricopeptide_repeat | 329 | 353 |
| IPR002885 | Pentatricopeptide_repeat | 267 | 294 |
| IPR002885 | Pentatricopeptide_repeat | 466 | 491 |
| IPR002885 | Pentatricopeptide_repeat | 533 | 561 |
| IPR002885 | Pentatricopeptide_repeat | 76 | 95 |
| IPR002885 | Pentatricopeptide_repeat | 299 | 327 |
| IPR032867 | DYW_dom | 565 | 612 |
| No external refs found! |