Description : (at5g35530 : 397.0) Ribosomal protein S3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), K Homology (InterPro:IPR004087), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, eukaryotic/archaeal (InterPro:IPR005703); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3 family protein (TAIR:AT2G31610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 794.0) & (original description: no original description)
Gene families : OG_42_0001926 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001926_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_10436283g0010 | |
Cluster | HCCA clusters: Cluster_191 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_00336 | No alias | 40s ribosomal protein s3-3 | 0.03 | Orthogroups_2024-Update | |
Brara.C01612.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Brara.C01619.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.08 | Orthogroups_2024-Update | |
Brara.D01897.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
Brara.D01899.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
GRMZM2G074300 | No alias | Ribosomal protein S3 family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.10G133100 | No alias | Ribosomal protein S3 family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.16G207400 | No alias | Ribosomal protein S3 family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.20G083300 | No alias | Ribosomal protein S3 family protein | 0.04 | Orthogroups_2024-Update | |
Kfl00057_0410 | kfl00057_0410_v1.1 | (at5g35530 : 390.0) Ribosomal protein S3 family protein;... | 0.03 | Orthogroups_2024-Update | |
Mp1g16730.1 | No alias | component RPS3 of SSU proteome | 0.04 | Orthogroups_2024-Update | |
PSME_00007401-RA | No alias | (at5g35530 : 366.0) Ribosomal protein S3 family protein;... | 0.07 | Orthogroups_2024-Update | |
PSME_00040312-RA | No alias | (at5g35530 : 390.0) Ribosomal protein S3 family protein;... | 0.03 | Orthogroups_2024-Update | |
Potri.006G222100 | No alias | Ribosomal protein S3 family protein | 0.04 | Orthogroups_2024-Update | |
Pp1s127_74V6 | No alias | 40s ribosomal protein | 0.05 | Orthogroups_2024-Update | |
Pp1s29_222V6 | No alias | 40s ribosomal protein | 0.06 | Orthogroups_2024-Update | |
Pp1s31_178V6 | No alias | 40s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Pp1s41_146V6 | No alias | 40s ribosomal protein | 0.08 | Orthogroups_2024-Update | |
Pp1s454_3V6 | No alias | 40s ribosomal protein | 0.06 | Orthogroups_2024-Update | |
Seita.2G385700.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.13 | Orthogroups_2024-Update | |
Seita.6G050300.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Sobic.002G371100.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
Sobic.007G053300.1 | No alias | component *(uS3) of small ribosomal-subunit (SSU) proteome | 0.1 | Orthogroups_2024-Update | |
Solyc07g041310 | No alias | Ribosomal protein S3 family protein (AHRD V3.3 *** AT5G35530.1) | 0.06 | Orthogroups_2024-Update | |
Solyc08g061850 | No alias | Ribosomal protein S3 family protein (AHRD V3.3 *** AT5G35530.1) | 0.07 | Orthogroups_2024-Update | |
Solyc08g061960 | No alias | Ribosomal protein S3 family protein (AHRD V3.3 *** AT5G35530.1) | 0.07 | Orthogroups_2024-Update | |
Sopen07g020630 | No alias | Ribosomal protein S3, C-terminal domain | 0.08 | Orthogroups_2024-Update | |
Sopen08g017410 | No alias | Ribosomal protein S3, C-terminal domain | 0.05 | Orthogroups_2024-Update | |
Sopen08g017480 | No alias | Ribosomal protein S3, C-terminal domain | 0.08 | Orthogroups_2024-Update | |
evm.model.contig_2149.7 | No alias | (at5g35530 : 302.0) Ribosomal protein S3 family protein;... | 0.11 | Orthogroups_2024-Update | |
evm.model.tig00021462.41 | No alias | (at2g31610 : 358.0) Ribosomal protein S3 family protein;... | 0.09 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | InterProScan predictions |
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Predicted GO |
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0005047 | signal recognition particle binding | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
MF | GO:0005543 | phospholipid binding | IEP | Predicted GO |
MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005785 | signal recognition particle receptor complex | IEP | Predicted GO |
CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0009116 | nucleoside metabolic process | IEP | Predicted GO |
MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015672 | monovalent inorganic cation transport | IEP | Predicted GO |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Predicted GO |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Predicted GO |
BP | GO:0015988 | energy coupled proton transmembrane transport, against electrochemical gradient | IEP | Predicted GO |
BP | GO:0015991 | ATP hydrolysis coupled proton transport | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predicted GO |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Predicted GO |
BP | GO:0034220 | ion transmembrane transport | IEP | Predicted GO |
BP | GO:0042255 | ribosome assembly | IEP | Predicted GO |
BP | GO:0042256 | mature ribosome assembly | IEP | Predicted GO |
MF | GO:0042393 | histone binding | IEP | Predicted GO |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Predicted GO |
MF | GO:0043022 | ribosome binding | IEP | Predicted GO |
CC | GO:0044432 | endoplasmic reticulum part | IEP | Predicted GO |
CC | GO:0044455 | mitochondrial membrane part | IEP | Predicted GO |
MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Predicted GO |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Predicted GO |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Predicted GO |
BP | GO:0070925 | organelle assembly | IEP | Predicted GO |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predicted GO |
BP | GO:0090662 | ATP hydrolysis coupled transmembrane transport | IEP | Predicted GO |
BP | GO:0098655 | cation transmembrane transport | IEP | Predicted GO |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Predicted GO |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
CC | GO:0098798 | mitochondrial protein complex | IEP | Predicted GO |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Predicted GO |
BP | GO:0099131 | ATP hydrolysis coupled ion transmembrane transport | IEP | Predicted GO |
BP | GO:0099132 | ATP hydrolysis coupled cation transmembrane transport | IEP | Predicted GO |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Predicted GO |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predicted GO |
BP | GO:1902600 | proton transmembrane transport | IEP | Predicted GO |
No external refs found! |