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  5. MA_10436324g0010

MA_10436324g0010


Description : (at3g23990 : 851.0) mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.; heat shock protein 60 (HSP60); FUNCTIONS IN: copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to cyclopentenone, chaperone-mediated protein complex assembly, response to heat, mitochondrion organization; LOCATED IN: cytosol, cytosolic ribosome, mitochondrion, plasma membrane, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: heat shock protein 60-2 (TAIR:AT2G33210.1); Has 33706 Blast hits to 33652 proteins in 8680 species: Archae - 676; Bacteria - 21745; Metazoa - 1618; Fungi - 1515; Plants - 790; Viruses - 2; Other Eukaryotes - 7360 (source: NCBI BLink). & (q05046|ch62_cucma : 845.0) Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) - Cucurbita maxima (Pumpkin) (Winter squash) & (gnl|cdd|68872 : 95.9) no description available & (reliability: 1702.0) & (original description: no original description)


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10436324g0010
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
165043 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
At2g33210 No alias Chaperonin CPN60-like 1, mitochondrial... 0.03 Orthogroups_2024-Update
Bradi4g38090 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
Brara.C03496.1 No alias chaperone *(Hsp60) 0.08 Orthogroups_2024-Update
GRMZM2G074790 No alias heat shock protein 60-3A 0.02 Orthogroups_2024-Update
GRMZM2G416120 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
GRMZM2G434173 No alias chaperonin-60alpha 0.03 Orthogroups_2024-Update
Glyma.07G009600 No alias heat shock protein 60-3A 0.03 Orthogroups_2024-Update
Glyma.10G127800 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Glyma.11G195900 No alias chaperonin-60alpha 0.03 Orthogroups_2024-Update
Glyma.12G078100 No alias chaperonin-60alpha 0.04 Orthogroups_2024-Update
Glyma.15G250500 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G038830.19 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.04 Orthogroups_2024-Update
HORVU1Hr1G038680.8 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU5Hr1G125130.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Kfl00076_0150 kfl00076_0150_v1.... (p08927|rubb_pea : 851.0) RuBisCO large subunit-binding... 0.05 Orthogroups_2024-Update
LOC_Os03g64210 No alias T-complex protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.003G173900 No alias heat shock protein 60 0.05 Orthogroups_2024-Update
Pp1s276_75V6 No alias ru large subunit-binding protein subunit beta 0.02 Orthogroups_2024-Update
Seita.9G231400.1 No alias chaperone *(Hsp60) 0.02 Orthogroups_2024-Update
Sopen09g034150 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
Sopen11g028490 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
evm.model.tig00020943.69 No alias (p08823|ruba_wheat : 426.0) RuBisCO large... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 53 129
IPR002423 Cpn60/TCP-1 154 540
No external refs found!